Browse of TCMCG006C54195 protein

CDS

Accession Number	TCMCG006C54195
gbkey	CDS
Protein Id	XP_013726625.1
Location	complement(join(126136..126273,126359..126426,126506..126641,126740..127186,127291..127403,127487..127547,127641..127700,127782..127829,127915..127994,128559..128632,128854..129000,129076..129317,129521..129646))
Gene	LOC106430390
GeneID	106430390
Organism	Brassica napus

Protein

Length	579aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013871171.2
Definition	splicing factor U2af large subunit B-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	U2 snRNP auxiliary factor large subunit
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K12837        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03040        [VIEW IN KEGG] map03040        [VIEW IN KEGG]
GOs	GO:0000243        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003727        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005681        [VIEW IN EMBL-EBI] GO:0005684        [VIEW IN EMBL-EBI] GO:0008187        [VIEW IN EMBL-EBI] GO:0016604        [VIEW IN EMBL-EBI] GO:0016607        [VIEW IN EMBL-EBI] GO:0030628        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0036002        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071004        [VIEW IN EMBL-EBI] GO:0071010        [VIEW IN EMBL-EBI] GO:0089701        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAATTACGAAGGTAACGGAGATAGTGTCACTCTCGCCACCGATGACAATAACGACAAGGAGAACTACATAGCTAGGGAGAGCTCGCCATTCAAGTCTCTTGGTAGCGAGGACTCCAAGTCTCGAGATTCTCATGTTCTGGATAAGGATTCTTCAAGAAGCAGGGAGAAGGACAAGGCAAAGGGGCGTGATAAAGACAGGGACAGGGACAGGGAGAAGAGCAGGGACAGAGATAGGGAACGCGATCGCCATCGTAGAGATCGTCATAGGGACCGTAGCAGAGAACGTAATGAGAAAAGGGAACGTGAGAGAGATGATCTCGATGATGATGATGACGATGATCATTACAGAAGTCGACACCGTCACAGGAGCTCTCGCGATCGAGATAGAGAGGAGAGACACATGCGACGCTCACGCTCTCGCTCCAGGAGCCGCTCTGAACGTAGGTCAAGATCCGAGCATAGGCGTAGGTCTGAACATAGATCACGTTCACGCTCACGCTCACGGTCCAAGAGCAAGAGGGTAAGTGGATTCGATATGGCGCCCCCTGCTTCTGCAATGCTAGCTGCTACTGCTGTTGCTGCCGCAGCAGGCCAGGTTCCTAGTGTGCCAGCTACTGCTAGTATTCCAGGGATGTTCCCCAACATGCTTGCAATGGTCCCTGGTCAGCAAATGGGAGCGCTTCCTTTACTGCCAATGCAGGCAATGACTCAGCAGGCAACTAGGCATGCTCGACGAGTTTATGTTGGTGGCCTTCCACCCACTGCAAATGAACAGTCGGTTGCAACTTTCTTTAGCCAAGTGATGTCGGCGATTGGGGGAAACACTGCTGGGCTAGGCGATGCGGTGGTCAATGTTTACATAAACCATGAAAAGAAGTTCGCTTTTGTGGAGATGAGATCTGTTGAGGAGGCTAGTAATGCAATGGCACTAGACGGAATTATATTAGAGGGGGTTCCTGTAAAGGTGAGGAGGCCAACTGACTATAACCCGTCGCTTGCTGCAGCTCTTGGCCCGAGCCAGCCGAATCCCAGTCTCAATTTGGCGGCTGTTGGATTGTCTTCGGGGTCTACCGGTGGGCTTGAGGGTCCGGACCGCATTTTTGTTGGTGGGCTTCCTTATTACTTCACAGAAGAACAGATCAGGGAGCTCTTGGAGTCTTTTGGGCCCCTGAGAGGTTTTAACTTGGTTAAAGACAGGGAAACTGGAAACTCGAAGGGATATGCTTTTTGTGTTTTCCAAGATCCTTCAGTGACAGATATTGCTTGTGCCGCTCTAAACGGGATTAAGATGGGTGATAAGACACTTACAGTGAGGCGTGCAGTCCAGGGTGTGATTCAACCTAAACCTGAGCAAGAGGAAGTATTACTTCATGCTCAACAGCAGATTGCTTTGCAGAGGCTTATGCTACAACCGGGAAGCACGCCAACCAAGATTGTATGTTTGACTCAAGTGGTTACAGCTGATGATCTTGGAGACGATGAAGAACATGAAGACATAATGGAGGACATGAGACAAGAAGGTGGAAAATTCGGTAACTTGGTGAATGTTGTGATTCCGAGGCCCAATCCTGATCATGATCCAACACCAGGAGTTGGAAAGGTTTTCTTAGAGTATGCGGATGTAGATGGCGCAGCAAAGGCCAGATCGGGAATGAACGGAAGAAAATTTGGAGGAAACCAAGTGGTTGCTGTGTATTACCCCGAGAACAAGTTTGCACAAGGCGACTACGAAGGCTGA

Protein:   MNYEGNGDSVTLATDDNNDKENYIARESSPFKSLGSEDSKSRDSHVLDKDSSRSREKDKAKGRDKDRDRDREKSRDRDRERDRHRRDRHRDRSRERNEKRERERDDLDDDDDDDHYRSRHRHRSSRDRDREERHMRRSRSRSRSRSERRSRSEHRRRSEHRSRSRSRSRSKSKRVSGFDMAPPASAMLAATAVAAAAGQVPSVPATASIPGMFPNMLAMVPGQQMGALPLLPMQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMSAIGGNTAGLGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIILEGVPVKVRRPTDYNPSLAAALGPSQPNPSLNLAAVGLSSGSTGGLEGPDRIFVGGLPYYFTEEQIRELLESFGPLRGFNLVKDRETGNSKGYAFCVFQDPSVTDIACAALNGIKMGDKTLTVRRAVQGVIQPKPEQEEVLLHAQQQIALQRLMLQPGSTPTKIVCLTQVVTADDLGDDEEHEDIMEDMRQEGGKFGNLVNVVIPRPNPDHDPTPGVGKVFLEYADVDGAAKARSGMNGRKFGGNQVVAVYYPENKFAQGDYEG